Clustergrammer
CCL11CCL13CCL19CDH2COL14A1COL17A1COL1A1COL1A2COL3A1GREM1IL13RA2IL1RL1KRT5MMP1MMP7PLA2G2ARPS4Y1SCG5SFRP2GSM1854182.ch1-vs-GSM1854187.ch1GSM1854183.ch1-vs-GSM1854187.ch1GSM1854184.ch1-vs-GSM1854187.ch1GSM1854185.ch1-vs-GSM1854187.ch1GSM1854186.ch1-vs-GSM1854187.ch1GSM1854188.ch1-vs-GSM1854187.ch1GSM1854189.ch1-vs-GSM1854187.ch1GSM2467757.ch1-vs-GSM2467756.ch1GSM2467758.ch1-vs-GSM2467756.ch1GSM2467759.ch1-vs-GSM2467756.ch1GSM2467760.ch1-vs-GSM2467756.ch1GSM2467761.ch1-vs-GSM2467756.ch1GSM2467762.ch1-vs-GSM2467756.ch1GSM2467763.ch1-vs-GSM2467756.ch1GSM2467764.ch1-vs-GSM2467756.ch1GSM533883.ch1-vs-GSM533882.ch1GSM533884.ch1-vs-GSM533882.ch1GSM533885.ch1-vs-GSM533882.ch1GSM533886.ch1-vs-GSM533882.ch1GSM533887.ch1-vs-GSM533882.ch1GSM533888.ch1-vs-GSM533882.ch1GSM533889.ch1-vs-GSM533882.ch1GSM533890.ch1-vs-GSM533882.ch1GSM533891.ch1-vs-GSM533882.ch1GSM533892.ch1-vs-GSM533882.ch1GSM533893.ch1-vs-GSM533882.ch1GSM533894.ch1-vs-GSM533882.ch1GSM533895.ch1-vs-GSM533882.ch1GSM533896.ch1-vs-GSM533882.ch1GSM533897.ch1-vs-GSM533882.ch1GSM533898.ch1-vs-GSM533882.ch1GSM533899.ch1-vs-GSM533882.ch1GSM533900.ch1-vs-GSM533882.ch1GSM533901.ch1-vs-GSM533882.ch1GSM533902.ch1-vs-GSM533882.ch1GSM533903.ch1-vs-GSM533882.ch1GSM533904.ch1-vs-GSM533882.ch1GSM533905.ch1-vs-GSM533882.ch1GSM533906.ch1-vs-GSM533882.ch1GSM533907.ch1-vs-GSM533882.ch1GSM533908.ch1-vs-GSM533882.ch1GSM533909.ch1-vs-GSM533882.ch1GSM533910.ch1-vs-GSM533882.ch1GSM595411.ch1-vs-GSM595407.ch1GSM595414.ch1-vs-GSM595407.ch1GSM595416.ch1-vs-GSM595407.ch1GSM595417.ch1-vs-GSM595407.ch1GSM595419.ch1-vs-GSM595407.ch1GSM595421.ch1-vs-GSM595407.ch1GSM595422.ch1-vs-GSM595407.ch1GSM595423.ch1-vs-GSM595407.ch1GSM595424.ch1-vs-GSM595407.ch1GSM595425.ch1-vs-GSM595407.ch1GSM595426.ch1-vs-GSM595407.ch1GSM595427.ch1-vs-GSM595407.ch1GSM595428.ch1-vs-GSM595407.ch1GSM595429.ch1-vs-GSM595407.ch1GSM595432.ch1-vs-GSM595407.ch1GSM595434.ch1-vs-GSM595407.ch1GSM595435.ch1-vs-GSM595407.ch1GSM595437.ch1-vs-GSM595407.ch1GSM595439.ch1-vs-GSM595407.ch1GSM595441.ch1-vs-GSM595407.ch1GSM595443.ch1-vs-GSM595407.ch1GSM595445.ch1-vs-GSM595407.ch1GSM791344.ch1-vs-GSM791347.ch1GSM791345.ch1-vs-GSM791347.ch1GSM791346.ch1-vs-GSM791347.ch1GSM791348.ch1-vs-GSM791347.ch1GSM791349.ch1-vs-GSM791347.ch1GSM806204.ch1-vs-GSM806371.ch1GSM806205.ch1-vs-GSM806371.ch1GSM806206.ch1-vs-GSM806371.ch1GSM806207.ch1-vs-GSM806371.ch1GSM806208.ch1-vs-GSM806371.ch1GSM806209.ch1-vs-GSM806371.ch1GSM806210.ch1-vs-GSM806371.ch1GSM806211.ch1-vs-GSM806371.ch1GSM806212.ch1-vs-GSM806371.ch1GSM806213.ch1-vs-GSM806371.ch1GSM806214.ch1-vs-GSM806371.ch1GSM806215.ch1-vs-GSM806371.ch1GSM806216.ch1-vs-GSM806371.ch1GSM806217.ch1-vs-GSM806371.ch1GSM806218.ch1-vs-GSM806371.ch1GSM806219.ch1-vs-GSM806371.ch1GSM806220.ch1-vs-GSM806371.ch1GSM806221.ch1-vs-GSM806371.ch1GSM806222.ch1-vs-GSM806371.ch1GSM806223.ch1-vs-GSM806371.ch1GSM806224.ch1-vs-GSM806371.ch1GSM806225.ch1-vs-GSM806371.ch1GSM806226.ch1-vs-GSM806371.ch1GSM806227.ch1-vs-GSM806371.ch1GSM806228.ch1-vs-GSM806371.ch1GSM806229.ch1-vs-GSM806371.ch1GSM806230.ch1-vs-GSM806371.ch1GSM806231.ch1-vs-GSM806371.ch1GSM806232.ch1-vs-GSM806371.ch1GSM806233.ch1-vs-GSM806371.ch1GSM806234.ch1-vs-GSM806371.ch1GSM806235.ch1-vs-GSM806371.ch1GSM806236.ch1-vs-GSM806371.ch1GSM806237.ch1-vs-GSM806371.ch1GSM806238.ch1-vs-GSM806371.ch1GSM806239.ch1-vs-GSM806371.ch1GSM806240.ch1-vs-GSM806371.ch1GSM806241.ch1-vs-GSM806371.ch1GSM806242.ch1-vs-GSM806371.ch1GSM806243.ch1-vs-GSM806371.ch1GSM806244.ch1-vs-GSM806371.ch1GSM806245.ch1-vs-GSM806371.ch1GSM806246.ch1-vs-GSM806371.ch1GSM806247.ch1-vs-GSM806371.ch1GSM806248.ch1-vs-GSM806371.ch1GSM806249.ch1-vs-GSM806371.ch1GSM806250.ch1-vs-GSM806371.ch1GSM806251.ch1-vs-GSM806371.ch1GSM806252.ch1-vs-GSM806371.ch1GSM806253.ch1-vs-GSM806371.ch1GSM806254.ch1-vs-GSM806371.ch1GSM806255.ch1-vs-GSM806371.ch1GSM806256.ch1-vs-GSM806371.ch1GSM806257.ch1-vs-GSM806371.ch1GSM806258.ch1-vs-GSM806371.ch1GSM806259.ch1-vs-GSM806371.ch1GSM806260.ch1-vs-GSM806371.ch1GSM806261.ch1-vs-GSM806371.ch1GSM806262.ch1-vs-GSM806371.ch1GSM806263.ch1-vs-GSM806371.ch1GSM806264.ch1-vs-GSM806371.ch1GSM806265.ch1-vs-GSM806371.ch1GSM806266.ch1-vs-GSM806371.ch1GSM806267.ch1-vs-GSM806371.ch1GSM806268.ch1-vs-GSM806371.ch1GSM806269.ch1-vs-GSM806371.ch1GSM806270.ch1-vs-GSM806371.ch1GSM806271.ch1-vs-GSM806371.ch1GSM806272.ch1-vs-GSM806371.ch1GSM806273.ch1-vs-GSM806371.ch1GSM806274.ch1-vs-GSM806371.ch1GSM806275.ch1-vs-GSM806371.ch1GSM806276.ch1-vs-GSM806371.ch1GSM806277.ch1-vs-GSM806371.ch1GSM806278.ch1-vs-GSM806371.ch1GSM806279.ch1-vs-GSM806371.ch1GSM806280.ch1-vs-GSM806371.ch1GSM806281.ch1-vs-GSM806371.ch1GSM806282.ch1-vs-GSM806371.ch1GSM806283.ch1-vs-GSM806371.ch1GSM806284.ch1-vs-GSM806371.ch1GSM806285.ch1-vs-GSM806371.ch1GSM806286.ch1-vs-GSM806371.ch1GSM806287.ch1-vs-GSM806371.ch1GSM806288.ch1-vs-GSM806371.ch1GSM806289.ch1-vs-GSM806371.ch1GSM806290.ch1-vs-GSM806371.ch1GSM806291.ch1-vs-GSM806371.ch1GSM806292.ch1-vs-GSM806371.ch1GSM806293.ch1-vs-GSM806371.ch1GSM806294.ch1-vs-GSM806371.ch1GSM806295.ch1-vs-GSM806371.ch1GSM806296.ch1-vs-GSM806371.ch1GSM806297.ch1-vs-GSM806371.ch1GSM806298.ch1-vs-GSM806371.ch1GSM806299.ch1-vs-GSM806371.ch1GSM806300.ch1-vs-GSM806371.ch1GSM806301.ch1-vs-GSM806371.ch1GSM806302.ch1-vs-GSM806371.ch1GSM806303.ch1-vs-GSM806371.ch1GSM806304.ch1-vs-GSM806371.ch1GSM806305.ch1-vs-GSM806371.ch1GSM806306.ch1-vs-GSM806371.ch1GSM806307.ch1-vs-GSM806371.ch1GSM806308.ch1-vs-GSM806371.ch1GSM806309.ch1-vs-GSM806371.ch1GSM806310.ch1-vs-GSM806371.ch1GSM806311.ch1-vs-GSM806371.ch1GSM806312.ch1-vs-GSM806371.ch1GSM806313.ch1-vs-GSM806371.ch1GSM806314.ch1-vs-GSM806371.ch1GSM806315.ch1-vs-GSM806371.ch1GSM806316.ch1-vs-GSM806371.ch1GSM806317.ch1-vs-GSM806371.ch1GSM806318.ch1-vs-GSM806371.ch1GSM806319.ch1-vs-GSM806371.ch1GSM806320.ch1-vs-GSM806371.ch1GSM806321.ch1-vs-GSM806371.ch1GSM806322.ch1-vs-GSM806371.ch1GSM806323.ch1-vs-GSM806371.ch1GSM806324.ch1-vs-GSM806371.ch1GSM806325.ch1-vs-GSM806371.ch1GSM806326.ch1-vs-GSM806371.ch1GSM806327.ch1-vs-GSM806371.ch1GSM806328.ch1-vs-GSM806371.ch1GSM806329.ch1-vs-GSM806371.ch1GSM806330.ch1-vs-GSM806371.ch1GSM806331.ch1-vs-GSM806371.ch1GSM806332.ch1-vs-GSM806371.ch1GSM806333.ch1-vs-GSM806371.ch1GSM806334.ch1-vs-GSM806371.ch1GSM806335.ch1-vs-GSM806371.ch1GSM806336.ch1-vs-GSM806371.ch1GSM806337.ch1-vs-GSM806371.ch1GSM806338.ch1-vs-GSM806371.ch1GSM806339.ch1-vs-GSM806371.ch1GSM806340.ch1-vs-GSM806371.ch1GSM806341.ch1-vs-GSM806371.ch1GSM806342.ch1-vs-GSM806371.ch1GSM806343.ch1-vs-GSM806371.ch1GSM806344.ch1-vs-GSM806371.ch1GSM806345.ch1-vs-GSM806371.ch1GSM806346.ch1-vs-GSM806371.ch1GSM806347.ch1-vs-GSM806371.ch1GSM806348.ch1-vs-GSM806371.ch1GSM806349.ch1-vs-GSM806371.ch1GSM806350.ch1-vs-GSM806371.ch1GSM806351.ch1-vs-GSM806371.ch1GSM806352.ch1-vs-GSM806371.ch1GSM806353.ch1-vs-GSM806371.ch1GSM806354.ch1-vs-GSM806371.ch1GSM806355.ch1-vs-GSM806371.ch1GSM806356.ch1-vs-GSM806371.ch1GSM806357.ch1-vs-GSM806371.ch1GSM806358.ch1-vs-GSM806371.ch1GSM806359.ch1-vs-GSM806371.ch1GSM806360.ch1-vs-GSM806371.ch1GSM806361.ch1-vs-GSM806371.ch1GSM806362.ch1-vs-GSM806371.ch1GSM806363.ch1-vs-GSM806371.ch1GSM806364.ch1-vs-GSM806371.ch1GSM806365.ch1-vs-GSM806371.ch1GSM806366.ch1-vs-GSM806371.ch1GSM806367.ch1-vs-GSM806371.ch1GSM806368.ch1-vs-GSM806371.ch1GSM806369.ch1-vs-GSM806371.ch1GSM806370.ch1-vs-GSM806371.ch1GSM806372.ch1-vs-GSM806371.ch1GSM806373.ch1-vs-GSM806371.ch1GSM806374.ch1-vs-GSM806371.ch1GSM806375.ch1-vs-GSM806371.ch1GSM806376.ch1-vs-GSM806371.ch1GSM806377.ch1-vs-GSM806371.ch1GSM806378.ch1-vs-GSM806371.ch1GSM806379.ch1-vs-GSM806371.ch1GSM806380.ch1-vs-GSM806371.ch1GSM806381.ch1-vs-GSM806371.ch1GSM806382.ch1-vs-GSM806371.ch1GSM806383.ch1-vs-GSM806371.ch1GSM806384.ch1-vs-GSM806371.ch1GSM806385.ch1-vs-GSM806371.ch1GSM806386.ch1-vs-GSM806371.ch1GSM806387.ch1-vs-GSM806371.ch1GSM806388.ch1-vs-GSM806371.ch1GSM806389.ch1-vs-GSM806371.ch1GSM806390.ch1-vs-GSM806371.ch1GSM806391.ch1-vs-GSM806371.ch1GSM806392.ch1-vs-GSM806371.ch1GSM806393.ch1-vs-GSM806371.ch1GSM806394.ch1-vs-GSM806371.ch1GSM806395.ch1-vs-GSM806371.ch1GSM806396.ch1-vs-GSM806371.ch1GSM806397.ch1-vs-GSM806371.ch1GSM806398.ch1-vs-GSM806371.ch1GSM806399.ch1-vs-GSM806371.ch1GSM806400.ch1-vs-GSM806371.ch1GSM806401.ch1-vs-GSM806371.ch1GSM806402.ch1-vs-GSM806371.ch1GSM806403.ch1-vs-GSM806371.ch1GSM806404.ch1-vs-GSM806371.ch1GSM806405.ch1-vs-GSM806371.ch1GSM806406.ch1-vs-GSM806371.ch1GSM806407.ch1-vs-GSM806371.ch1GSM806408.ch1-vs-GSM806371.ch1GSM806409.ch1-vs-GSM806371.ch1GSM806410.ch1-vs-GSM806371.ch1GSM806411.ch1-vs-GSM806371.ch1GSM806412.ch1-vs-GSM806371.ch1GSM806413.ch1-vs-GSM806371.ch1GSM806414.ch1-vs-GSM806371.ch1GSM806415.ch1-vs-GSM806371.ch1GSM806416.ch1-vs-GSM806371.ch1GSM806417.ch1-vs-GSM806371.ch1GSM806418.ch1-vs-GSM806371.ch1GSM806419.ch1-vs-GSM806371.ch1GSM806420.ch1-vs-GSM806371.ch1GSM862605.ch1-vs-GSM862609.ch1GSM862606.ch1-vs-GSM862609.ch1GSM862607.ch1-vs-GSM862609.ch1GSM862608.ch1-vs-GSM862609.ch1GSM862610.ch1-vs-GSM862609.ch1GSM862611.ch1-vs-GSM862609.ch1GSM862612.ch1-vs-GSM862609.ch1GSESample_typeTest_statusRef_statusContrastGene

Above is a clustergram/heatmap visualization of your input matrix. The rows and columns have been hierarchically clustered, using the Scipy library in Python, using cosine distance and average linkage. Red/blue cells in the matrix represent positive/negative values in your matrix. The visualization interactive (zoomable, reorderable, filterable) and shareable - the current URL is permanent and shareable.

Column Similarity Matrix
GSM1854182.ch1-vs-GSM1854187.ch1GSM1854183.ch1-vs-GSM1854187.ch1GSM1854184.ch1-vs-GSM1854187.ch1GSM1854185.ch1-vs-GSM1854187.ch1GSM1854186.ch1-vs-GSM1854187.ch1GSM1854188.ch1-vs-GSM1854187.ch1GSM1854189.ch1-vs-GSM1854187.ch1GSM2467757.ch1-vs-GSM2467756.ch1GSM2467758.ch1-vs-GSM2467756.ch1GSM2467759.ch1-vs-GSM2467756.ch1GSM2467760.ch1-vs-GSM2467756.ch1GSM2467761.ch1-vs-GSM2467756.ch1GSM2467762.ch1-vs-GSM2467756.ch1GSM2467763.ch1-vs-GSM2467756.ch1GSM2467764.ch1-vs-GSM2467756.ch1GSM533883.ch1-vs-GSM533882.ch1GSM533884.ch1-vs-GSM533882.ch1GSM533885.ch1-vs-GSM533882.ch1GSM533886.ch1-vs-GSM533882.ch1GSM533887.ch1-vs-GSM533882.ch1GSM533888.ch1-vs-GSM533882.ch1GSM533889.ch1-vs-GSM533882.ch1GSM533890.ch1-vs-GSM533882.ch1GSM533891.ch1-vs-GSM533882.ch1GSM533892.ch1-vs-GSM533882.ch1GSM533893.ch1-vs-GSM533882.ch1GSM533894.ch1-vs-GSM533882.ch1GSM533895.ch1-vs-GSM533882.ch1GSM533896.ch1-vs-GSM533882.ch1GSM533897.ch1-vs-GSM533882.ch1GSM533898.ch1-vs-GSM533882.ch1GSM533899.ch1-vs-GSM533882.ch1GSM533900.ch1-vs-GSM533882.ch1GSM533901.ch1-vs-GSM533882.ch1GSM533902.ch1-vs-GSM533882.ch1GSM533903.ch1-vs-GSM533882.ch1GSM533904.ch1-vs-GSM533882.ch1GSM533905.ch1-vs-GSM533882.ch1GSM533906.ch1-vs-GSM533882.ch1GSM533907.ch1-vs-GSM533882.ch1GSM533908.ch1-vs-GSM533882.ch1GSM533909.ch1-vs-GSM533882.ch1GSM533910.ch1-vs-GSM533882.ch1GSM595411.ch1-vs-GSM595407.ch1GSM595414.ch1-vs-GSM595407.ch1GSM595416.ch1-vs-GSM595407.ch1GSM595417.ch1-vs-GSM595407.ch1GSM595419.ch1-vs-GSM595407.ch1GSM595421.ch1-vs-GSM595407.ch1GSM595422.ch1-vs-GSM595407.ch1GSM595423.ch1-vs-GSM595407.ch1GSM595424.ch1-vs-GSM595407.ch1GSM595425.ch1-vs-GSM595407.ch1GSM595426.ch1-vs-GSM595407.ch1GSM595427.ch1-vs-GSM595407.ch1GSM595428.ch1-vs-GSM595407.ch1GSM595429.ch1-vs-GSM595407.ch1GSM595432.ch1-vs-GSM595407.ch1GSM595434.ch1-vs-GSM595407.ch1GSM595435.ch1-vs-GSM595407.ch1GSM595437.ch1-vs-GSM595407.ch1GSM595439.ch1-vs-GSM595407.ch1GSM595441.ch1-vs-GSM595407.ch1GSM595443.ch1-vs-GSM595407.ch1GSM595445.ch1-vs-GSM595407.ch1GSM791344.ch1-vs-GSM791347.ch1GSM791345.ch1-vs-GSM791347.ch1GSM791346.ch1-vs-GSM791347.ch1GSM791348.ch1-vs-GSM791347.ch1GSM791349.ch1-vs-GSM791347.ch1GSM806204.ch1-vs-GSM806371.ch1GSM806205.ch1-vs-GSM806371.ch1GSM806206.ch1-vs-GSM806371.ch1GSM806207.ch1-vs-GSM806371.ch1GSM806208.ch1-vs-GSM806371.ch1GSM806209.ch1-vs-GSM806371.ch1GSM806210.ch1-vs-GSM806371.ch1GSM806211.ch1-vs-GSM806371.ch1GSM806212.ch1-vs-GSM806371.ch1GSM806213.ch1-vs-GSM806371.ch1GSM806214.ch1-vs-GSM806371.ch1GSM806215.ch1-vs-GSM806371.ch1GSM806216.ch1-vs-GSM806371.ch1GSM806217.ch1-vs-GSM806371.ch1GSM806218.ch1-vs-GSM806371.ch1GSM806219.ch1-vs-GSM806371.ch1GSM806220.ch1-vs-GSM806371.ch1GSM806221.ch1-vs-GSM806371.ch1GSM806222.ch1-vs-GSM806371.ch1GSM806223.ch1-vs-GSM806371.ch1GSM806224.ch1-vs-GSM806371.ch1GSM806225.ch1-vs-GSM806371.ch1GSM806226.ch1-vs-GSM806371.ch1GSM806227.ch1-vs-GSM806371.ch1GSM806228.ch1-vs-GSM806371.ch1GSM806229.ch1-vs-GSM806371.ch1GSM806230.ch1-vs-GSM806371.ch1GSM806231.ch1-vs-GSM806371.ch1GSM806232.ch1-vs-GSM806371.ch1GSM806233.ch1-vs-GSM806371.ch1GSM806234.ch1-vs-GSM806371.ch1GSM806235.ch1-vs-GSM806371.ch1GSM806236.ch1-vs-GSM806371.ch1GSM806237.ch1-vs-GSM806371.ch1GSM806238.ch1-vs-GSM806371.ch1GSM806239.ch1-vs-GSM806371.ch1GSM806240.ch1-vs-GSM806371.ch1GSM806241.ch1-vs-GSM806371.ch1GSM806242.ch1-vs-GSM806371.ch1GSM806243.ch1-vs-GSM806371.ch1GSM806244.ch1-vs-GSM806371.ch1GSM806245.ch1-vs-GSM806371.ch1GSM806246.ch1-vs-GSM806371.ch1GSM806247.ch1-vs-GSM806371.ch1GSM806248.ch1-vs-GSM806371.ch1GSM806249.ch1-vs-GSM806371.ch1GSM806250.ch1-vs-GSM806371.ch1GSM806251.ch1-vs-GSM806371.ch1GSM806252.ch1-vs-GSM806371.ch1GSM806253.ch1-vs-GSM806371.ch1GSM806254.ch1-vs-GSM806371.ch1GSM806255.ch1-vs-GSM806371.ch1GSM806256.ch1-vs-GSM806371.ch1GSM806257.ch1-vs-GSM806371.ch1GSM806258.ch1-vs-GSM806371.ch1GSM806259.ch1-vs-GSM806371.ch1GSM806260.ch1-vs-GSM806371.ch1GSM806261.ch1-vs-GSM806371.ch1GSM806262.ch1-vs-GSM806371.ch1GSM806263.ch1-vs-GSM806371.ch1GSM806264.ch1-vs-GSM806371.ch1GSM806265.ch1-vs-GSM806371.ch1GSM806266.ch1-vs-GSM806371.ch1GSM806267.ch1-vs-GSM806371.ch1GSM806268.ch1-vs-GSM806371.ch1GSM806269.ch1-vs-GSM806371.ch1GSM806270.ch1-vs-GSM806371.ch1GSM806271.ch1-vs-GSM806371.ch1GSM806272.ch1-vs-GSM806371.ch1GSM806273.ch1-vs-GSM806371.ch1GSM806274.ch1-vs-GSM806371.ch1GSM806275.ch1-vs-GSM806371.ch1GSM806276.ch1-vs-GSM806371.ch1GSM806277.ch1-vs-GSM806371.ch1GSM806278.ch1-vs-GSM806371.ch1GSM806279.ch1-vs-GSM806371.ch1GSM806280.ch1-vs-GSM806371.ch1GSM806281.ch1-vs-GSM806371.ch1GSM806282.ch1-vs-GSM806371.ch1GSM806283.ch1-vs-GSM806371.ch1GSM806284.ch1-vs-GSM806371.ch1GSM806285.ch1-vs-GSM806371.ch1GSM806286.ch1-vs-GSM806371.ch1GSM806287.ch1-vs-GSM806371.ch1GSM806288.ch1-vs-GSM806371.ch1GSM806289.ch1-vs-GSM806371.ch1GSM806290.ch1-vs-GSM806371.ch1GSM806291.ch1-vs-GSM806371.ch1GSM806292.ch1-vs-GSM806371.ch1GSM806293.ch1-vs-GSM806371.ch1GSM806294.ch1-vs-GSM806371.ch1GSM806295.ch1-vs-GSM806371.ch1GSM806296.ch1-vs-GSM806371.ch1GSM806297.ch1-vs-GSM806371.ch1GSM806298.ch1-vs-GSM806371.ch1GSM806299.ch1-vs-GSM806371.ch1GSM806300.ch1-vs-GSM806371.ch1GSM806301.ch1-vs-GSM806371.ch1GSM806302.ch1-vs-GSM806371.ch1GSM806303.ch1-vs-GSM806371.ch1GSM806304.ch1-vs-GSM806371.ch1GSM806305.ch1-vs-GSM806371.ch1GSM806306.ch1-vs-GSM806371.ch1GSM806307.ch1-vs-GSM806371.ch1GSM806308.ch1-vs-GSM806371.ch1GSM806309.ch1-vs-GSM806371.ch1GSM806310.ch1-vs-GSM806371.ch1GSM806311.ch1-vs-GSM806371.ch1GSM806312.ch1-vs-GSM806371.ch1GSM806313.ch1-vs-GSM806371.ch1GSM806314.ch1-vs-GSM806371.ch1GSM806315.ch1-vs-GSM806371.ch1GSM806316.ch1-vs-GSM806371.ch1GSM806317.ch1-vs-GSM806371.ch1GSM806318.ch1-vs-GSM806371.ch1GSM806319.ch1-vs-GSM806371.ch1GSM806320.ch1-vs-GSM806371.ch1GSM806321.ch1-vs-GSM806371.ch1GSM806322.ch1-vs-GSM806371.ch1GSM806323.ch1-vs-GSM806371.ch1GSM806324.ch1-vs-GSM806371.ch1GSM806325.ch1-vs-GSM806371.ch1GSM806326.ch1-vs-GSM806371.ch1GSM806327.ch1-vs-GSM806371.ch1GSM806328.ch1-vs-GSM806371.ch1GSM806329.ch1-vs-GSM806371.ch1GSM806330.ch1-vs-GSM806371.ch1GSM806331.ch1-vs-GSM806371.ch1GSM806332.ch1-vs-GSM806371.ch1GSM806333.ch1-vs-GSM806371.ch1GSM806334.ch1-vs-GSM806371.ch1GSM806335.ch1-vs-GSM806371.ch1GSM806336.ch1-vs-GSM806371.ch1GSM806337.ch1-vs-GSM806371.ch1GSM806338.ch1-vs-GSM806371.ch1GSM806339.ch1-vs-GSM806371.ch1GSM806340.ch1-vs-GSM806371.ch1GSM806341.ch1-vs-GSM806371.ch1GSM806342.ch1-vs-GSM806371.ch1GSM806343.ch1-vs-GSM806371.ch1GSM806344.ch1-vs-GSM806371.ch1GSM806345.ch1-vs-GSM806371.ch1GSM806346.ch1-vs-GSM806371.ch1GSM806347.ch1-vs-GSM806371.ch1GSM806348.ch1-vs-GSM806371.ch1GSM806349.ch1-vs-GSM806371.ch1GSM806350.ch1-vs-GSM806371.ch1GSM806351.ch1-vs-GSM806371.ch1GSM806352.ch1-vs-GSM806371.ch1GSM806353.ch1-vs-GSM806371.ch1GSM806354.ch1-vs-GSM806371.ch1GSM806355.ch1-vs-GSM806371.ch1GSM806356.ch1-vs-GSM806371.ch1GSM806357.ch1-vs-GSM806371.ch1GSM806358.ch1-vs-GSM806371.ch1GSM806359.ch1-vs-GSM806371.ch1GSM806360.ch1-vs-GSM806371.ch1GSM806361.ch1-vs-GSM806371.ch1GSM806362.ch1-vs-GSM806371.ch1GSM806363.ch1-vs-GSM806371.ch1GSM806364.ch1-vs-GSM806371.ch1GSM806365.ch1-vs-GSM806371.ch1GSM806366.ch1-vs-GSM806371.ch1GSM806367.ch1-vs-GSM806371.ch1GSM806368.ch1-vs-GSM806371.ch1GSM806369.ch1-vs-GSM806371.ch1GSM806370.ch1-vs-GSM806371.ch1GSM806372.ch1-vs-GSM806371.ch1GSM806373.ch1-vs-GSM806371.ch1GSM806374.ch1-vs-GSM806371.ch1GSM806375.ch1-vs-GSM806371.ch1GSM806376.ch1-vs-GSM806371.ch1GSM806377.ch1-vs-GSM806371.ch1GSM806378.ch1-vs-GSM806371.ch1GSM806379.ch1-vs-GSM806371.ch1GSM806380.ch1-vs-GSM806371.ch1GSM806381.ch1-vs-GSM806371.ch1GSM806382.ch1-vs-GSM806371.ch1GSM806383.ch1-vs-GSM806371.ch1GSM806384.ch1-vs-GSM806371.ch1GSM806385.ch1-vs-GSM806371.ch1GSM806386.ch1-vs-GSM806371.ch1GSM806387.ch1-vs-GSM806371.ch1GSM806388.ch1-vs-GSM806371.ch1GSM806389.ch1-vs-GSM806371.ch1GSM806390.ch1-vs-GSM806371.ch1GSM806391.ch1-vs-GSM806371.ch1GSM806392.ch1-vs-GSM806371.ch1GSM806393.ch1-vs-GSM806371.ch1GSM806394.ch1-vs-GSM806371.ch1GSM806395.ch1-vs-GSM806371.ch1GSM806396.ch1-vs-GSM806371.ch1GSM806397.ch1-vs-GSM806371.ch1GSM806398.ch1-vs-GSM806371.ch1GSM806399.ch1-vs-GSM806371.ch1GSM806400.ch1-vs-GSM806371.ch1GSM806401.ch1-vs-GSM806371.ch1GSM806402.ch1-vs-GSM806371.ch1GSM806403.ch1-vs-GSM806371.ch1GSM806404.ch1-vs-GSM806371.ch1GSM806405.ch1-vs-GSM806371.ch1GSM806406.ch1-vs-GSM806371.ch1GSM806407.ch1-vs-GSM806371.ch1GSM806408.ch1-vs-GSM806371.ch1GSM806409.ch1-vs-GSM806371.ch1GSM806410.ch1-vs-GSM806371.ch1GSM806411.ch1-vs-GSM806371.ch1GSM806412.ch1-vs-GSM806371.ch1GSM806413.ch1-vs-GSM806371.ch1GSM806414.ch1-vs-GSM806371.ch1GSM806415.ch1-vs-GSM806371.ch1GSM806416.ch1-vs-GSM806371.ch1GSM806417.ch1-vs-GSM806371.ch1GSM806418.ch1-vs-GSM806371.ch1GSM806419.ch1-vs-GSM806371.ch1GSM806420.ch1-vs-GSM806371.ch1GSM862605.ch1-vs-GSM862609.ch1GSM862606.ch1-vs-GSM862609.ch1GSM862607.ch1-vs-GSM862609.ch1GSM862608.ch1-vs-GSM862609.ch1GSM862610.ch1-vs-GSM862609.ch1GSM862611.ch1-vs-GSM862609.ch1GSM862612.ch1-vs-GSM862609.ch1GSESample_typeTest_statusRef_statusGSESample_typeTest_statusRef_statusContrastContrast

Above is a similarity matrix of the columns in your input matrix. The cells in the matrix represent the similarity between columns, where red/blue represent positive/negative similarity (measured as 1 - cosine-distance). Similarity matrices offer a more detailed view of the similarities and differences between rows/columms, e.g. blue cells indicate data points that behave 'oppositely' and this can not be easily seen in a clustergram/heatmap view.

Row Similarity Matrix
CCL11CCL13CCL19CDH2COL14A1COL17A1COL1A1COL1A2COL3A1GREM1IL13RA2IL1RL1KRT5MMP1MMP7PLA2G2ARPS4Y1SCG5SFRP2CCL11CCL13CCL19CDH2COL14A1COL17A1COL1A1COL1A2COL3A1GREM1IL13RA2IL1RL1KRT5MMP1MMP7PLA2G2ARPS4Y1SCG5SFRP2GeneGene

Above is a similarity matrix of the rows in your input matrix. The cells in the matrix represent the similarity between rows, where red/blue represent positive/negative similarity (measured as 1 - cosine-distance).